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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795225.1_cds_XP_016442959.1_3733
CDS Infomation

[gene=LOC107768348] [db_xref=GeneID:107768348] [protein=3-dehydroquinate synthase, chloroplastic-like] [protein_id=XP_016442959.1] [location=join(28480..28829,31070..31220,31310..31477,31766..31992,32499..32622,32999..33061,33219..33362,33443..33574)] [gbkey=CDS]
Sequence

ATGCTTTCCCTCCGCCACACCAAACCTCAAATGGCGTCGTCTTTCTGCCCAAAACAGGCT
TTATCTTTCACCAGCTCTGCCCACCAACTCCACCAATCCAGAGCAATTCCACGGGACATC
CACGTGCGTTTCCCTGCTTCCGGCTCTTTACCTTCTTCTTCCAGGTGTGGGGTGAAGTCG
AGTGCCGCACGATTGAAAGTGCTGGCAACTTCTGCGACGAAAGTGATGGATCAGTCGCCG
AGTAAAGCGAGTTCTCAGGCTCCTACAGTTGTTGAAGTGGATCTGGGTAATCGGAGCTAC
CCGATTTATATTGGGTCTGGACTTCTTGATCAACCTGACCTCCTTCAAAGACATATTCAT
GGGAAAAGAGTCCTTGTAGTGACTAACACTACAGTTGCCCCTCTATATCTTGAAAAAACT
ATAAGTGCTTTGACAGCCGGAAATCCTAATGTTACTGTAGAAAGTGTCATTTTGCCAGAT
GGTGAGCAATTTAAAAACATGGATACTCTTATGAAAGTCTTTGATAAAGCCATCGAATCA
AGGCTGGACCGTCGTTGTACATTCGTCGCCCTCGGCGGTGGAGTCATAGGTGACATGTGT
GGATATGCTGCCGCTTCCTACCTCCGTGGAGTTAATTTTATTCAGATTCCTACGACTGTT
ATGGCACAGGTAGATTCTTCAGTTGGAGGCAAAACTGGAATAAACCATCCGCTTGGTAAA
AATATGATTGGCGCATTCTACCAACCACAGTGTGTGCTTGTAGACACGGACACCCTGGAT
ACTTTACCAGATAGAGAATTAGCATCCGGCCTTGCAGAGGTGATAAAATATGGACTCATT
AGAGACGCTGAGTTCTTTGAGTGGCAAGAGCAGAATATGCCATTATTATTAGCAAGGGAC
CCTACTGCATTTACCTATGCTATCAAGCGTTCCTGTGAAAACAAAGCAGAGGTTGTTTCT
TTAGATGAGAAGGAAAGCGGATTGAGGGCAACTTTGAACTTGGGTCATACCTTTGGTCAT
GCAGTTGAGACTGGTTTTGGCTATGGGCAGTGGCTTCACGGAGAAGCAGTTGCTGCTGGC
ACGGTCATGGCTGTTGACATGTCACGCCGCCTTGGTTGGATTGATGATTCACTGGTACAA
CGGGTGCAGAATATCTTACAACAGGCAAAGCTGCCAACTTCACCTCCAGAAACTATGACT
GTAGAGATGTTCAAGTCTATCATGGCTGTTGATAAAAAAGTGGCCGATGGGAAGCTAAGA
CTCATCCTTCTAAAAGGTCCGCTAGGTAACTGTGTCTTTACCGGTGATTATGACCAGAAG
GCCCTCGATGAAACACTGCGTGCATTTTCCAAATCTTAA

Peptide Sequence

PEP ID

XP_016442959.1
PEP Infomation

PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MLSLRHTKPQMASSFCPKQALSFTSSAHQLHQSRAIPRDIHVRFPASGSLPSSSRCGVKS
SAARLKVLATSATKVMDQSPSKASSQAPTVVEVDLGNRSYPIYIGSGLLDQPDLLQRHIH
GKRVLVVTNTTVAPLYLEKTISALTAGNPNVTVESVILPDGEQFKNMDTLMKVFDKAIES
RLDRRCTFVALGGGVIGDMCGYAAASYLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGK
NMIGAFYQPQCVLVDTDTLDTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMPLLLARD
PTAFTYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAVETGFGYGQWLHGEAVAAG
TVMAVDMSRRLGWIDDSLVQRVQNILQQAKLPTSPPETMTVEMFKSIMAVDKKVADGKLR
LILLKGPLGNCVFTGDYDQKALDETLRAFSKS

Transcript Sequence

Gene sequence data has not been registered.